CDS

Accession Number TCMCG053C11986
gbkey CDS
Protein Id XP_034207500.1
Location complement(join(5439018..5439286,5439868..5440000,5440203..5440727,5440991..5441275,5441962..5442241,5442320..5444121,5444233..5444298,5444492..5444617,5444957..5445358,5445462..5445643,5445730..5445866,5446876..5447339,5447565..5448023,5449188..5449449,5449788..5449968,5450639..5450978,5451065..5451317,5451415..5451607,5451975..5452321,5452407..5452481,5452605..5452821,5452937..5453140,5453746..5453928,5454345..5454451,5455265..5455338,5455434..5455512,5455705..5455749,5455867..5456024,5456123..5456245,5456326..5456394))
Gene LOC117621248
GeneID 117621248
Organism Prunus dulcis

Protein

Length 2679aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA631757
db_source XM_034351609.1
Definition small subunit processome component 20 homolog isoform X2 [Prunus dulcis]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCAACCCCATCACAAGCTCAGGCCGTCAAGTCGCTCAACAAATCCCCAGGACGCCGCCGTTTTGTCTTCAAGAGCTTCTCTCAGAGACTTGAAGAAGTTGAAGTCGATGTATTCCGAAGCCTTGATAAAGTTAAACCAGAGCCGCAAGCGGGCTCTACGTTTTTCCGGGACTGCCTCGTAGAATGGAGGGAATTGAACACGGCTGAGGATTTCATCGCTTTCTATGAGAAAATGACGCCATTGGTCCAAACATTGCCTTTGGTGTTGTTGCATAAGGAAACCATAATCTCAGAACTCCTTTCTAGATTACAGATGAAAGCAAGGTTGTCGCTTGAACCCATTCTCAGGTTAATTGCAGTCCTGTGTAGAGATCTCCTTGAGGACTTTATCCCGTTCTTGCCAAGGATTGCTGACTCTCTAGTGTCTCTCCTCGAATGTGGTGCCGATAGGGAGCCAGAGGCCATTGAGCAGATCTTCACATCTTGGTCATCTATTATGATGTACTTGCAAAAATATCTTGTACAAAAGCTTGTGCATGTTCTAAATGTTACTGTAAATTTGAGATATTATCCAAAAGATTACATCCAAGAATTTATGGCAGAGGGGATGTCATTCTTGCTGAGAAATGCACCTTTTGAGCAGCTTAAAAAAGGTGTCAAAAAGATCATGTTTGAAGTTGTGCAGAAATCAATACCTGTCAGAAAATATGGAGTCAGTGCTTTACTATATTTTGTCATGCGAGGGGCCTCATCAAGGTTCCATTCTAAAGCTGAGCAAGTGTTGCATTTATTGATGGACGACTTGATACTTGGTATTGGTGAAAACTTCAGCCAGGGTTCAGACACTGTTGTTGAAGTCTTAATTTCTGCATTACAAAGATTATGTGATGACTTGGACTCCAAGGAGTTGAACATAATGTTCAATTGCTTATATCAGGAAATAACTGACTGTATGATTAATGGAGGTGTTGAACGTTTAAGCTGCCTGTTGTCATTGCTTGTTTCTACTGTTCAAGTCAAGAATGGCCAAAGGGTTTCTGATTACCAACAAATGCTTGAAATTGTGGGTTTGCTTGTGCGAACATTTATCATGCCTTCTGGCATTACAATGGCAGAGGAACATTCATCTGATGTTGTGGATAAGGTTTTGCAGTTAATGCTCTGTATTCTTAGTGGACTGCACAGTTACAATGATATGTCAACCATATCTAGTTGTTCATTGCAATGGGCTCCTGTATTTGATCTAAAGAACTCAAGCTTGTTAGGTTTTATTCGACAACTTTTACAAAAGGACGTTTGCATACTAGATATCTTCGCAGTTAACATTTTAAGGGCCATGAATGATTTATTAGAAACTTCACAGGAAGATGTAATTTATTTGTTACTCACCTTCAATGAAAAACTACAAATGGAAACCCAAAGCTTGACCTTCTTAGATAGAACACGTGAAGGAGTTCCAAGGATTCAAGGTTTTATGCGTGGGGCTATCAGCAATTGGGTTGGGGTTTTAAAGGGTATTGTAAATGGGGATTCATCATCCACTTTAATTCATGAAGCTGACTTGGCCCTGCTGTGGGGAGTCATTAACTGCTTTCCACAAATAGCAGAATCCGAAGAAGATTTTTCGCTGTTGATGGATTTGATGGATGCAGATGATCAAATTCTGATGATTGAAGCTGACAATATTGCAGGTTTTCCTAAACACACTTGGGAGAGCCTAATTGGTGCTACCTTAAATTCCTATTACAAACTTATTCGTGGTAAAAAATCTGAGCTTGACGAAACAAGCAGATTTTTGCATCTTGGAAATAGACACAAATCATGTCCACAAGTGTTGGTTGCTGTTGCTGATTTTTTGGATTCCGTGTATGGGCCTATTATGGAAGGAGACACCAAGTCTAGAACTTATCATCCAGAACTACAAGCAGATAAAGCCATAGATGCTTTGGACATATTTGCTGATAATTTGTGCCACTCAGACAGAGGGATTCGTGCTTCAACTCTTAGAATATTGTGTCACTATGAAACTCTAAATTGCAATATTTGCACAGAGGATGAGCCAGTTGCGAAGAAACTGAGAACTGAAGTTTCTCTTACTTGTCATGTGGATAACCAAGGCTTTAATGTTCTTCCACTCCTCCTCTCAATCGAGTCAACTCCGCTTTCAATTTCTACCAGTAGGAAAGTTACTCTATTGATTTCTAGAATACAGATGGGCCTCTCCACTGGAAGAATAGCTGAAGCTTATCTGCCCCTTGTTTTGAATGGGATGATTGGTATCTTCCATAACCGGTTTAGTTATCTTTGGAATCCTACATCAGAGTGCCTTGCAGTTCTGATTAGCCAAAATACTGGACTTGTATGGGAGAGATTACTTCATTATTTTGAACAATGCCTATCGAGATTTCAAGCGTCTTTTGATCAAGTTGAGGAAGTAAATTCTAAGTTGACCAACAAGTCAAGTGATCTGGTTGAAGGCTTTAATTTGTGTATTACTTCCAAGTCTGATAGTACGCCTTCTGCAGCAGTATTATCTTCTTTGCTTCAATCTTTACAAAGAATTCCAACCATAATTGAATCCAAGTCTCGTCAGATTATACCTTTGTTTTTAAAGTTTCTGGGCTACAATTGCAAAGACTTTAAAAGGCTTTTGGATGAAAATGATGCTGAAATACAGACAAAGGTTCTTGATTGCCTGTTAATCTGGAAAGATGATTTCCTGCTCCCATATAGTCAACAATTGAAAAACCTAGTCAGCTTCCATAATTTGAGAGAAGAATTAACAACATGGAGTTTATCCAGAGAGTCTAATCTAATTGAAGAAGAACACAGACCTGACCTTGTGCCTATGGTTATCCGTCTTCTGATGCCCAAAGTTCGCAAATTGAAGAAACATGCTTCTCAGAAGCTTTCAAGATTAAATCATCGGAAGGCAGTTCTTAGTTTCATAGCTCAAGTTGAAGTTGAAAAGCTTCCTCTTTTCTTTGTGTTGTTAATAAAGCCCTTGCAAATTGTTTCAATGGGAAGTGACGGTGCTGCAAGCTGGTTTTGGACCTTGCCAAACGGTTCTTTGGCTGAATTTCAAGCATTGGATTTCTTAAAATATTTCACTTTGAGCAATATATCAGCCCTATCTTGGAAGAAAAGATCTGGTTTTCTTCATGTGATTGAAGATATCCTTGGAGTTTTTGATGCGTCTCATGTTGGCCCCTTTCTTGATTTTCTAATGGGGTGTGTCGTTCGAATATTAGGAAGCTGCAGTTTAAGTCTTGATGTGGCAAAAGGCAATGGATCTTCGGTTGAAAATTATCCAGATGTGGACCTTACTTTGCTTGGAAAAGACAGTGCAGTGGAAAATAATGTTTTGATCTCCACAACTTTGAGGCAGTTAAAGGATTTGAGGTCTTTATGTCTGAAAATTGTATCCTTTGTTCTCAATAAGTATGAAGATCATGAATTTAGTTGTGAGTTCTGGGACTTATTCTTCATGTCATGCAAGCCTTTAATTGATGGTTTCAAGCAGGAAGGACCCAGCGGCCAGAAACCTAGTTCACTATTCTCTTGTTTTCTTGCTCTGTCTAGAAGCCAAAAACTTGTACCACTACTGTATAGGGAACAAAAACTTGTTCCTGATATACTCTCAATTCTAACCGTCACGTCAGCATCTAAAGCTATTGTATCTTGCGTTCTTAAGTTTGTTGAGAACCTTTTGAATCTTGATCACGAGTTGGATGATGAAGATAGTGCTGTAAAAAGAGTTATACTCCCGAACCTTGAAGCACTTATTGATAGCCTGCATAGTCTTTTTCACAGTAATAATGCTGCCAAGAGGAAATTGTTTAAACACCCAGGAGACGCAGAAACAAGAATTTTCAAATTTTTACCGAAGTATATAAAAAGTGCAGTGCCAGCCAGGAAATTTGTGGATATATTGCTTCCAGTTTTAGCAAATGGAACTCAAAATTCAGATTTTTGTTTTGAAGTGGTGCAAGTAATTCGTGATATTGTTCCAGTATTGGGGAGTGAGATTACAAATAAAATTCTGAATGCAGTATCTCCCCTACTTACTTCTACTGATCTAGATAAGCGTGTTTTTATCTGTGATCTTCTGGATGCTGTTGCTAGAGTAGACCCTTCTGTTCACTTTGTGGCAAAACTTGTCCAGGACTTGAATGCAACCTCTAATACAGAATTGGGTAGCCTGGATTATGACAATGTTGTCAATGCTTATGAAAAGATCAGTGTTGATATATTCTATACAATTCGAGAGGATCATGCATTGGTCATTTTGTCTCATTGTGTCTATGACATGTCATCTGAAGAATTAATCTTGAGGCACAGTGCTTACAAGTCATTGCGTTCATTTGTTGAATTTGCTGCCCTAATACTTGGCCAAGTGGTGAGCAACCACTGTGAAATGCCTGATATGCCTGACAAGATGTTGGCCTCTGATAATTGTTATTGGACAAGAGCATGCATTCAGAGAATAACAAGCAAGTTTCTTTTGAACCATATGGGTAATGCTTTGAAGAGAGGAACTTCTATTAAAAAGGAATGGGTTGATTTACTAAGAGAAATGGTGTTAAAACTCCCAGAAGTGGCAAATCTGGGTTCATTGAAGGCTCTTTGTGATGAAGATGCTGAAATTGATTTTTTCAACAATATCGTTCACTTACAGAAACATAGGAGAGCAAGGGCTTTGTCACGCTTTAGGAATGTTATCAACGCCAGCTATATGCCAGAGGGCATCACAAAGAAAGTGTTTGTACCCCTCTTTTTCAATATGTTGCTGGAGGAGCATGAAGGAAAAGGAGAACATGTAAAAAATGTCTGCATAGAGGCCCTTGCTTCAATTTCCAGTCACATGGAATGGAATTCATACTACTCATTATTGATGAGATGCTTTAATGAGATGATCAAGAATCCTAATAAACAAAAGCTCCTTCTGAGGCTCATCTGTTCTATCTTGGACCAGTTTCACTTTTCAGATGCCAACGACTCTTTGGATAATGTTTCCAACACAGGGACCACTGATTCTGGCACGTCAATCTTGCGTAGATGTAGTAGTTCTGTTTCGGCAAATGAAATACAGACATGCCTTCAAAAAGTTGTGCTTCCTAAGATACATAAGTTACTGAGTGATTCTGAGAAGGTCAATGCTAACATCAATCTTGCTGCACTGAGAGTATTAAGGTTGCTACCGGGAGATGTAATGGACTCACAGCTTCCTAGCATTGTTCATCGAATTTCAAATTTTTTGAAGAATCGATTAGAAAGCATCCGTGAAGAAGCTAGGTCCGCTTTGGCCGCTTGTTTGAAGGAGCTGGGGCTGGAATACTTACATTTTATAGTCAAGGTTTTGCGAAGTACATTGAAACGGGGATATGAGTTACATGTGTTGGGATACACACTGAACTTTATTTTGTCAAAGTTTCTTGTGACTCCAATTAGTGGGAAATTGGACTACTGTTTGGAAGATCTCCTTTATATTGTACAGAATGACATTCTTGGAGACGTTGCTGAGGAAAAAGATGTTGAAAAGATTGCTTCCAAGATGAAAGAAACTAAGAAGCAGAAGTCTTTTGAAACCCTGAGATTGATTGCTCAAAGCATAACATTCAAAAGCCACGCCTTGAAACTTCTATCCCCTGTTACTGCTCAATTCAAGAAACATTTGACACCAAAAACCAAGACAAAATTGGAAAGTATGTTAACTCACATAGCGGCTGGTATTGAATACAATCCAACTGTTGATCAGACTGACCTATTTATATTTGTATATGGTCTGATTGAAGATGGAATAAATGAAGAAAATGGCCAGGGTGAGAATTTGTTTATTACACGGGTAAATGGACGCCGTCGAAATGATTCGACTAGAAAAGCTGTTTCGTCAGGCTGTGTTGCAGGTGCTAAATCAGTATGTTCACATCTTATTTCAGTGTTTGCTCTTGGGATATTTCAGAAGCGTATAAAGAATTTGAAATTGGGAAATAACGATGCACAAATGTTGTCAATGTTAGATCCGTTCGTCTTACTGTTAGGGAAGTGCTTGAACTCCAAGTATGAAGATGTCGTATCTGCATCACTTAGATGCCTCACCCCACTTGTCAGGTTGCCTTTGCCTGCCATCGAATCTCAGGCAGATAATATTAAGGCCGCACTGTTTGGTATTGCTGAAAGTTCAGTTAATACTGGCAGCTCTCTAATGCAGTCATGTCTGAGGCTGTTGACTGTACTTTTGCGCGGCACCAAAATCACTCTGTCATCTGATCAGCTACATCTGTTGATTCAGCTTCCACTATTTGTTGATCTTGAGAAGAATCCCTCCTTTGTTGCTCTTTCACTTCTAAAGGCAATTGTTAACCGCAAGCTAGTTGTTCCCGAGATATATGATCTTGTAACTAGAGTTGCAGAATTGATGGTAACAAGCCAAGTAGAACCAATTCGTCACAAATGTAGCAAGATTTTATTGCAATTCTTACTTGATTATCGTCTCTCTGAAAAACGCTTGCAACAGCATTTAGATTTTCTGCTGTCAAATCTGAGGTATGAGCATTCGAGTGGAAGAAAATCCGTGCTTGACATGCTCCACACAATTATTGTTAAATTTCCAAAAGGCGTTATAGATGAGCAATCCCAGACTTTTTTTGTCCATTTGGTGGTTTGCTTGTCTAATGATCAAGATAATGAAGTTCGTTCCTTGGCTGGTGCAGCTATAAAATGTCTCACCGGCTATATAAGCCTACATTCATTTCGTTCCATTCTTGAGTACAGCCTATCTTGGTATTTGGGTGCAAAGCAACAACTGTGGAGTGCTGCAGCACAGGTTTTGGGATTACTGGTTGAAGTCATGGAGAAAGGATTTCACAAGCATATCAACAAAATATTGCCAGTTGAAGTCATGGAGAAAGAATTTCATAAGCATATCAACAGAATATTACCAGTGACTAAATGTATCTTAGAGTCTACCATCAATGCAGTCACTGATGGGCAACTAGATTTTTCTAATGAAACTAACATTCCTTTATGGAAGGAGGCATATTATTCGTTAGTGATGCTGGAGAAAATGCTGCATCAGTTCCATGGTCTATGCTTTGATAGGGATCTTGAGGATATATGGGATGCAATTTGTGAATTACTGCTGCATCCACACATGTGGTTACGTTGCATTTCCAGTCGCCTCGTAGCTTTCTACTTTGCTGCTGTCACAGAGGCATGCTCTAAAAATCATGAAAAACCATTTGGGACTTACTATCTTATTAGACCAAGTAGACTTTTCATGATAGCTGTTTATCTCTGCTGCCAAATGAAGACACAGCTTGTTGATGATACTGCCAGTAATCTGATTACACAAAATCTTGTGTCCACTATTTGTGGGGTGCATTCGTTGGTGGGACAAACAGAGTGTGCAGATCCCACCCAGTTCTGGTCCACCCTTGAAGAGCATGAGCAGGGCTGTTTTCTTAAAGCTTTTGAGTTGCTCGATGCTAGAAAAGGAAGGATCATGTTTTTATCTCTTACCTCTGGAATATGCGACAAAAATAATGAAAGCCCCTCTAAGAATATTCGGTACTTGCTTGTCTCCAGCCTGCTCAAAAAAATGGGAAAAATTGCCCTTCAAATGGAGGCTATTCAGATGAAAATTGTCTTTGATAGTTTTGGAAAAATTTCATCCGAAATAAGTCAGGAAGACTGCCTGCTTCATGCCTCTGAAATCTTGTTGCCCTTGTATAAAGTTTGCGAAGGATTTTCTGGGAGAGTGATTCCTGAAAATATGAAGCAATTAGCGCAAGAAATTTCTGAACGTGTACGAAATAAACTAGGCGTACAAAATTATGTACTGGTTTACAATGACATCCGGAAGAATCTCAAGGCAAAGAGGGATAAGAGGAAACATGAAGAAAAGCGCATGGCTGTTACCGATCCTATGCGAAATGCAAAGAGAAAATTGAGGATTGCGGAGAAGCATCGTGCCAACAAGAAAAGGAAGATGATGACAATGAAAATGGGGAGATGGACGCATTCCAAGTCAAAGTAG
Protein:  
MATPSQAQAVKSLNKSPGRRRFVFKSFSQRLEEVEVDVFRSLDKVKPEPQAGSTFFRDCLVEWRELNTAEDFIAFYEKMTPLVQTLPLVLLHKETIISELLSRLQMKARLSLEPILRLIAVLCRDLLEDFIPFLPRIADSLVSLLECGADREPEAIEQIFTSWSSIMMYLQKYLVQKLVHVLNVTVNLRYYPKDYIQEFMAEGMSFLLRNAPFEQLKKGVKKIMFEVVQKSIPVRKYGVSALLYFVMRGASSRFHSKAEQVLHLLMDDLILGIGENFSQGSDTVVEVLISALQRLCDDLDSKELNIMFNCLYQEITDCMINGGVERLSCLLSLLVSTVQVKNGQRVSDYQQMLEIVGLLVRTFIMPSGITMAEEHSSDVVDKVLQLMLCILSGLHSYNDMSTISSCSLQWAPVFDLKNSSLLGFIRQLLQKDVCILDIFAVNILRAMNDLLETSQEDVIYLLLTFNEKLQMETQSLTFLDRTREGVPRIQGFMRGAISNWVGVLKGIVNGDSSSTLIHEADLALLWGVINCFPQIAESEEDFSLLMDLMDADDQILMIEADNIAGFPKHTWESLIGATLNSYYKLIRGKKSELDETSRFLHLGNRHKSCPQVLVAVADFLDSVYGPIMEGDTKSRTYHPELQADKAIDALDIFADNLCHSDRGIRASTLRILCHYETLNCNICTEDEPVAKKLRTEVSLTCHVDNQGFNVLPLLLSIESTPLSISTSRKVTLLISRIQMGLSTGRIAEAYLPLVLNGMIGIFHNRFSYLWNPTSECLAVLISQNTGLVWERLLHYFEQCLSRFQASFDQVEEVNSKLTNKSSDLVEGFNLCITSKSDSTPSAAVLSSLLQSLQRIPTIIESKSRQIIPLFLKFLGYNCKDFKRLLDENDAEIQTKVLDCLLIWKDDFLLPYSQQLKNLVSFHNLREELTTWSLSRESNLIEEEHRPDLVPMVIRLLMPKVRKLKKHASQKLSRLNHRKAVLSFIAQVEVEKLPLFFVLLIKPLQIVSMGSDGAASWFWTLPNGSLAEFQALDFLKYFTLSNISALSWKKRSGFLHVIEDILGVFDASHVGPFLDFLMGCVVRILGSCSLSLDVAKGNGSSVENYPDVDLTLLGKDSAVENNVLISTTLRQLKDLRSLCLKIVSFVLNKYEDHEFSCEFWDLFFMSCKPLIDGFKQEGPSGQKPSSLFSCFLALSRSQKLVPLLYREQKLVPDILSILTVTSASKAIVSCVLKFVENLLNLDHELDDEDSAVKRVILPNLEALIDSLHSLFHSNNAAKRKLFKHPGDAETRIFKFLPKYIKSAVPARKFVDILLPVLANGTQNSDFCFEVVQVIRDIVPVLGSEITNKILNAVSPLLTSTDLDKRVFICDLLDAVARVDPSVHFVAKLVQDLNATSNTELGSLDYDNVVNAYEKISVDIFYTIREDHALVILSHCVYDMSSEELILRHSAYKSLRSFVEFAALILGQVVSNHCEMPDMPDKMLASDNCYWTRACIQRITSKFLLNHMGNALKRGTSIKKEWVDLLREMVLKLPEVANLGSLKALCDEDAEIDFFNNIVHLQKHRRARALSRFRNVINASYMPEGITKKVFVPLFFNMLLEEHEGKGEHVKNVCIEALASISSHMEWNSYYSLLMRCFNEMIKNPNKQKLLLRLICSILDQFHFSDANDSLDNVSNTGTTDSGTSILRRCSSSVSANEIQTCLQKVVLPKIHKLLSDSEKVNANINLAALRVLRLLPGDVMDSQLPSIVHRISNFLKNRLESIREEARSALAACLKELGLEYLHFIVKVLRSTLKRGYELHVLGYTLNFILSKFLVTPISGKLDYCLEDLLYIVQNDILGDVAEEKDVEKIASKMKETKKQKSFETLRLIAQSITFKSHALKLLSPVTAQFKKHLTPKTKTKLESMLTHIAAGIEYNPTVDQTDLFIFVYGLIEDGINEENGQGENLFITRVNGRRRNDSTRKAVSSGCVAGAKSVCSHLISVFALGIFQKRIKNLKLGNNDAQMLSMLDPFVLLLGKCLNSKYEDVVSASLRCLTPLVRLPLPAIESQADNIKAALFGIAESSVNTGSSLMQSCLRLLTVLLRGTKITLSSDQLHLLIQLPLFVDLEKNPSFVALSLLKAIVNRKLVVPEIYDLVTRVAELMVTSQVEPIRHKCSKILLQFLLDYRLSEKRLQQHLDFLLSNLRYEHSSGRKSVLDMLHTIIVKFPKGVIDEQSQTFFVHLVVCLSNDQDNEVRSLAGAAIKCLTGYISLHSFRSILEYSLSWYLGAKQQLWSAAAQVLGLLVEVMEKGFHKHINKILPVEVMEKEFHKHINRILPVTKCILESTINAVTDGQLDFSNETNIPLWKEAYYSLVMLEKMLHQFHGLCFDRDLEDIWDAICELLLHPHMWLRCISSRLVAFYFAAVTEACSKNHEKPFGTYYLIRPSRLFMIAVYLCCQMKTQLVDDTASNLITQNLVSTICGVHSLVGQTECADPTQFWSTLEEHEQGCFLKAFELLDARKGRIMFLSLTSGICDKNNESPSKNIRYLLVSSLLKKMGKIALQMEAIQMKIVFDSFGKISSEISQEDCLLHASEILLPLYKVCEGFSGRVIPENMKQLAQEISERVRNKLGVQNYVLVYNDIRKNLKAKRDKRKHEEKRMAVTDPMRNAKRKLRIAEKHRANKKRKMMTMKMGRWTHSKSK